snakemake>=3.11.2,<6
pyyaml>=3.12,<4
numpy>=1.13.1,<2
biopython>=1.69,<2
pandas>=0.20.3
interlap>=0.2.5
pysam>=0.11.1,<0.14
pyfaidx>=0.4.8.4
distance>=0.1.3
umi_tools>=0.5.0,<1