nextstrain-augur

Depended on by

Graph

Depends On

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=1.0.0, ==1.*)
phylo-treetime (phylo-treetime >=0.7.4, ==0.7.*)
snakemake (snakemake >=5.4.0, <5.11)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.7.4, ==0.7.*)
snakemake (snakemake >=5.4.0, <5.11)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.7.4, ==0.7.*)
snakemake (snakemake >=5.4.0, <5.11)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.7.2, ==0.7.*)
snakemake (snakemake >=5.4.0, <5.11)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.7.2, ==0.7.*)
snakemake (snakemake >=5.4.0, <5.11)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.7.2, ==0.7.*)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.7.2, ==0.7.*)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.7.2, ==0.7.*)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.5.6, <0.7)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.5.6, <0.7)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.5.6, <0.7)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
packaging (packaging >=19.2)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.5.6, <0.7)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.5.6, <0.7)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.5.6, <0.7)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.0, ==0.6.*)
biopython (biopython >=1.67, ==1.*)
jsonschema (jsonschema >=3.0.0, ==3.*)
pandas (pandas >=0.20.0, ==0.*)
phylo-treetime (phylo-treetime >=0.5.6, <0.7)
snakemake (snakemake >=5.4.0, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.4, ==0.6.*)
biopython (biopython >=1.73, ==1.*)
boto (boto >=2.38, ==2.*)
cvxopt (cvxopt >=1.1.9, ==1.1.*)
jsonschema (jsonschema ==3.0.0a3)
pandas (pandas >=0.23.4)
phylo-treetime (phylo-treetime >=0.5.6, ==0.5.*)
snakemake (snakemake >=5.1.5, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.4, ==0.6.*)
biopython (biopython >=1.73, ==1.*)
boto (boto >=2.38, ==2.*)
cvxopt (cvxopt >=1.1.9, ==1.1.*)
ipdb (ipdb >=0.10.1)
jsonschema (jsonschema ==3.0.0a3)
matplotlib (matplotlib >=2.0, ==2.*)
pandas (pandas >=0.23.4)
phylo-treetime (phylo-treetime >=0.5.6, ==0.5.*)
seaborn (seaborn >=0.9.0)
snakemake (snakemake >=5.1.5, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.4, ==0.6.*)
biopython (biopython >=1.73, ==1.*)
boto (boto >=2.38, ==2.*)
cvxopt (cvxopt >=1.1.9, ==1.1.*)
ipdb (ipdb >=0.10.1)
jsonschema (jsonschema ==3.0.0a3)
matplotlib (matplotlib >=2.0, ==2.*)
pandas (pandas >=0.23.4, ==0.23.*)
phylo-treetime (phylo-treetime >=0.5.6, ==0.5.*)
seaborn (seaborn >=0.9.0, ==0.9.*)
snakemake (snakemake >=5.1.5, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.4, ==0.6.*)
biopython (biopython >=1.73, ==1.*)
boto (boto >=2.38, ==2.*)
cvxopt (cvxopt >=1.1.9, ==1.1.*)
ipdb (ipdb >=0.10.1)
jsonschema (jsonschema ==3.0.0a3)
matplotlib (matplotlib >=2.0, ==2.*)
pandas (pandas >=0.23.4, ==0.23.*)
phylo-treetime (phylo-treetime >=0.5.6, ==0.5.*)
seaborn (seaborn >=0.9.0, ==0.9.*)
snakemake (snakemake >=5.1.5, ==5.*)

Graph

Depends On

bcbio-gff (bcbio-gff >=0.6.4, ==0.6.*)
biopython (biopython >=1.73, ==1.*)
boto (boto >=2.38, ==2.*)
cvxopt (cvxopt >=1.1.9, ==1.1.*)
ipdb (ipdb >=0.10.1)
jsonschema (jsonschema ==3.0.0a3)
matplotlib (matplotlib >=2.0, ==2.*)
pandas (pandas >=0.23.4, ==0.23.*)
phylo-treetime (phylo-treetime >=0.5.3, ==0.5.*)
seaborn (seaborn >=0.9.0, ==0.9.*)
snakemake (snakemake >=5.1.5, ==5.*)